Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946230.1_cds_XP_016488457.1_79097
CDS Infomation

[gene=LOC107808446] [db_xref=GeneID:107808446] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016488457.1] [location=complement(join(80082..80194,80453..80914,81070..81841))] [gbkey=CDS]
Sequence

ATGTCGATAAAAAAAGGAAGTGTGATGGAGAGGTTTATTGGCATTGTTCATGTTCGAACT
ACTAGTGCTTTATTTCTAAAGAAAGCAATAGTTGATGTACTTGTTCATCATTCTTTAAGT
TTATCTTCTATACGTGGACAATGTTATGATGGGGCAAGCAATATGCAAGGTGATATTAAA
GGTCTTAAAAAGTTGATTAAACAAGAAAGTAGATCGGCTCATTCTATTCATTGTTTTGCA
TATCAATTTCAACTGACTCTTGTTATGATTTCTAAGAAGTGTGTTCAAGTAGGTGAACTT
ATATTATTGGTTTCAAATATTTTGAATATGTTGGGAGCTTCTTATAAACGTGTGGATGAA
TTTCGAGATTCTCAAAACGAAAAACTCCAAGAGGCATTAGATATGGGTGAACTAAAAACA
GGTAGATGCTTGAATCAAGAACTTGGTCTTGTTAGAGCTGGTGATACTCGTTGGGGATCT
CACTTCAAGTCATTTGGAAACTTTATTCATATGTTTGGCTCTATTATTGATGTTCTTGAT
GCTCTTGTTGAAGATGCAAGTACTTTAGATGATAAAGCTAAGGCATTGGGGTATCTCAAA
GCTTGTCAAACATATAAGGTTGCTTTCTGGTTGCATTTAATGACAGATATTTTGGGAATC
ACAAATGAGTTGAATGTATCCTTACAAAAAAAAGAGCAAGATATTGCAAATGTCATGCTA
CTAGTTCAAGTAGCAAAGAAAATAATGCAAACTTTAAGGAGGGATAATGAATTTTTTCAT
TGGAAACTTCAAGAACTTAATGATCGTTTTGACGAAGCGACGACTGATTTGCTTCATGGA
GTTGCTTGTTTGAATCCCATTGACTCATTTCAAGTTTTGATCAGAAAAATAATGAAGATG
GATGAATTGTATCCTGATGACTTTGATGAATTTAGGATGAGTGCTCTTGAGAATCAATTT
GCGAGTTATATTATTTTTGTTCATGATTTTGATGAAATGTTTTCCTATCTAAATGGGCTT
TCTGATCTTTCAAAAATATTAGTTAAGACAAAAAAGCATTCAGTTTATCCTCTTGTATTT
CTCTTAGTGAAACTTGCGTTGCTTCTGCCTGTTGCCACTGCAACTATTGAGAGAGCTTTC
TCAGCAATGAAGTTTATCAAAAATGACTTGCGGAATCGAATGGATGATGACTTTTTAGGC
GGTTGCATAGTGCCTTATGTAGAAAGAAAGAGAACTTCACCACTGCCTGCAGAGTATGCA
TTTGTGAGGCTTTCATTGCAATTGCAAAGGGAAGCTGGGCCATACAGTTTTTGCAATTGC
GAAGATTTCTTCGCATTTGCGAAGTAA

Peptide Sequence

PEP ID

XP_016488457.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MSIKKGSVMERFIGIVHVRTTSALFLKKAIVDVLVHHSLSLSSIRGQCYDGASNMQGDIK
GLKKLIKQESRSAHSIHCFAYQFQLTLVMISKKCVQVGELILLVSNILNMLGASYKRVDE
FRDSQNEKLQEALDMGELKTGRCLNQELGLVRAGDTRWGSHFKSFGNFIHMFGSIIDVLD
ALVEDASTLDDKAKALGYLKACQTYKVAFWLHLMTDILGITNELNVSLQKKEQDIANVML
LVQVAKKIMQTLRRDNEFFHWKLQELNDRFDEATTDLLHGVACLNPIDSFQVLIRKIMKM
DELYPDDFDEFRMSALENQFASYIIFVHDFDEMFSYLNGLSDLSKILVKTKKHSVYPLVF
LLVKLALLLPVATATIERAFSAMKFIKNDLRNRMDDDFLGGCIVPYVERKRTSPLPAEYA
FVRLSLQLQREAGPYSFCNCEDFFAFAK

Transcript Sequence

Gene sequence data has not been registered.